PR2
Publications
Global patterns and rates of habitat transitions across the eukaryotic tree of life
Mahwash Jamy, Charlie Biwer, Daniel Vaulot, Aleix Obiol, Hongmei Jing, Sari Peura, Ramon Massana, Fabien Burki
PDF Code Dataset Project Project Source Document Press release Uppsala
metaPR2: a database of eukaryotic 18S rRNA metabarcodes with an emphasis on protists
Daniel Vaulot, Clarence Wei Hung Sim, Denise Ong, Bryan Teo, Charlie Biwer, Mahwash Jamy, Adriana Lopes dos Santos
PDF Code Dataset Project Project Project Source Document Supplementary material Review
pr2-primer: an 18S rRNA primer database for protists
Daniel Vaulot, Stefan Geisen, Frédéric Mahé, David Bass
Preprint PDF Code Dataset Project Source Document Supplementary material
Comparison of coastal phytoplankton composition estimated from the V4 and V9 regions of the 18S rRNA gene with a focus on photosynthetic groups and especially Chlorophyta
Margot Tragin, Adriana Zingone, Daniel Vaulot
DINOREF : A curated dinoflagellate (Dinophyceae) reference database for the 18S rRNA gene
Solenn Mordret, Roberta Piredda, Daniel Vaulot, Marina Montresor, Wiebe H. C. F. Kooistra, Diana Sarno
Revision of the Genus Micromonas Manton et Parke (Chlorophyta, Mamiellophyceae), of the Type Species M. pusilla (Butcher) Manton & Parke and of the Species M. commoda van Baren, Bachy and Worden and Description of Two New Species Based on the Genetic and Phenotypic Characterization of Cultured Isolates
Nathalie Simon, Elodie Foulon, Daphne Grulois, Christophe Six, Yves Desdevises, Marie Latimier, Florence Le Gall, Margot Tragin, Aude Houdan, Evelyne Derelle, Fabien Jouenne, Dominique Marie, Sophie Le Panse, Daniel Vaulot, Birger Marin
Diversity and distribution of haptophytes revealed by environmental sequencing and metabarcoding – a review
Bente Edvardsen, Elianne Sirnaes Egge, Daniel Vaulot
Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA gene sequences
Margot Tragin, Adriana Lopes dos Santos, R. Christen, D. Vaulot
PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy
Johan Decelle, Sarah Romac, Rowena F. Stern, El Mahdi Bendif, Adriana Zingone, Stephane Audic, Michael D. Guiry, Laure Guillou, Desire Tessier, Florence Le Gall, et al.
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
Laure Guillou, Dipankar Bachar, Stephane Audic, David Bass, Cedric Berney, Lucie Bittner, Christophe Boutte, Gaetan Burgaud, Colomban de Vargas, Johan Decelle, et al.